Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796835.1_cds_XP_016451936.1_4562
CDS Infomation

[gene=LOC107776530] [db_xref=GeneID:107776530] [protein=uncharacterized protein LOC107776530] [protein_id=XP_016451936.1] [location=join(2826..3218,4357..4509,4595..4807,4895..4984,5194..5310,5886..6155,7721..7877,8341..8418,9044..9144,9412..9582,9983..10057,10187..10294,10736..11071)] [gbkey=CDS]
Sequence

ATGGCGGAGGAATTTGTGAAAGCAGTTGAAGACGGTGTACATCTATCGAAAAGGATATAT
TTCGGGAAGGATAGGGCGGTGGCGCCGCCGAAGCCGATGACGGCGATGGAGAAGGCGTCA
CAGTCATACCTGCCGGAATCTCCTATGCTGTACGCCGTGATTAATGATCCTGCTATAGTT
GATAACCCGGATATCCCGAGCTACCAGCCTCACGTGCACGGCAGGTGCGATCCTCCTGCT
TTGATTCCTCTTCAAATGAACGGAATTTCACTTGAAGCTGATTGTTATTTGGATAATATG
GCGTTCATTACTGTCACTGGATCATGGCGTGTGCATTGCGTCATGGGTAGCCGTAGCTGC
GACTGTCGTATCGCCATTCCCATGGGTGAACAGGGTTCAATTCTAGGTGTCGAGGTTGAG
TTACCCAGGAAAACTTACTGCACTAAAATAGTTGCCGTGGATGACGAAAGCGGAACAGAA
AAGCTAGCCAAAATTGAAGATGGATGCTTTCTGACGCCCCAAATTTTTACCCTTACAATA
CCACAGGTGGATGGTGGAACCAATATATCTGTCACGATTAGATGGTCTCAGAAGTTATTG
TATAGCAATGGCCAGCTAACCTTGGACGTACCATTTAGTTTTCCAGACTTTGTCACTCCA
GCTGGAAAGAAGATCTCTAAAAAAGAAAAGATACAGCTTAATATTAACTCTGGTCCTGGA
GCAGAAGTTATGTGCAAGACCACTAGTCACCCTCTGAAGGAGCGACAACGTCAAGCAGGA
AAGTTGGGCTTCTTCTACGAATCTGAAGTCCTTAATTGGTCAAGTTGTAACTTTGTTTTT
TCTTACACGGTTTCGTCGACTCATATTTCTGGCAGTGTACTTTTGCAATCGCCCCCACTA
CTTGACACCGACCAGAGAGAGATGTTTTGCTGCTCTCTTTTTCCGGGAGACCAGCAGTGT
AGGAAGGTCTTCAGAAAGGAAGTGGTATTTGTTGTTGATATAAGTGGGAGCATGAAGGGA
AAACCAATCGAGGATACCAAACAAGCGCTCTGTACGGCCTTGTCAAAGCTTGATTCTCAA
GATCTGTTTAATATAATAGCTTTCAACAATGAAAAGTACCTATTTTCTTCATCACTGGAA
TTGGCAACCAAGAAGGCTATTGAAAATGCAACTCAGTGGATTGGCACGAATTTTGTTGCT
GGTGGTGGAACAAATATTTTGAATCCGTTGACTCAGGCCATGGAGATGTTTTCCTATAGC
CAGCAACACATTCCTGTTATTTTCTTGGTCACTGACGGAGCTGTTGAAGATGAAAGACAC
ATCTGTGATGTTCTGAAGAGTCATCTGATGCAAAACCAAATGATATGCCCGCGGCTTTAT
ACATTAGGCATAGGGTTGTTCTGTAACCACTGTTTTTTGCGCATGCTTGCAATGATGAGT
CATGGCCACTATGCCGCTGCTTATGATGTTGATTCTATTGAAGTTCGTATGGAGCAGCTC
TTCTCCAGGGCATCATCCGTCATTCTTGCGAATATTTCCTTTGAGAACCTTGACGGTCTT
GAAGAATTTGAGGTGCTTCCCACTTCAACTCCAGACCTTTCATCTGAGGGTCCATTGGTG
TTGTCAGGCAGATACCGTGGAGTATTCCCCGAGATGCTTAAAGCTAAAGGAGTCCTTGCA
GACTTGAGTAACTTCTCTGTGGATCTGAAAGCTGTACAGTCAAAGGACATACCTCTTGAT
AAGGTGTTGGCGAGGCAACAGGTTGAACTGATTACTGCTCAGGCCTGGTTGACTGAAAAT
AAGGACCTTGAACAGAAGATAGCACAAACGAGTATACAACATGCAGTAATTTCTGAATAT
ACACGCATGATATTGATGGAGACCGATAGAGGCAAAGTAGTCACTGAGTCAACCTCCAAG
CGGAAGGTCTCCACTGCTGCTAAGAATATTGAAGAACCTAAATTGGAGAAGAAAATACTG
CTAGAGAATCTTGCTGTTGGTTTTGGTAACTACAGCGCTACAGTTGAAAATATTCCTCCT
GGAGCCTCTGAGACAAAACCCGAAACGGCAGAGATTTTAGCAAAGGCAGCATCTAACTGC
TGCGGAAAGATGTGTGACATATGCTGTTGCATGTGCTGTATTCGAACGTGTTCAAAGATG
AACGATCAGTGTGCAATTGTGCTGACGCAGTTTCTGGGTTCCTTGGCATGCTTAGGTTGC
TTCGCTTGCTGTGAATTATGCTGCTCTGTAAATGATGGATGA

Peptide Sequence

PEP ID

XP_016451936.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107776530 [Nicotiana tabacum]
Sequence

MAEEFVKAVEDGVHLSKRIYFGKDRAVAPPKPMTAMEKASQSYLPESPMLYAVINDPAIV
DNPDIPSYQPHVHGRCDPPALIPLQMNGISLEADCYLDNMAFITVTGSWRVHCVMGSRSC
DCRIAIPMGEQGSILGVEVELPRKTYCTKIVAVDDESGTEKLAKIEDGCFLTPQIFTLTI
PQVDGGTNISVTIRWSQKLLYSNGQLTLDVPFSFPDFVTPAGKKISKKEKIQLNINSGPG
AEVMCKTTSHPLKERQRQAGKLGFFYESEVLNWSSCNFVFSYTVSSTHISGSVLLQSPPL
LDTDQREMFCCSLFPGDQQCRKVFRKEVVFVVDISGSMKGKPIEDTKQALCTALSKLDSQ
DLFNIIAFNNEKYLFSSSLELATKKAIENATQWIGTNFVAGGGTNILNPLTQAMEMFSYS
QQHIPVIFLVTDGAVEDERHICDVLKSHLMQNQMICPRLYTLGIGLFCNHCFLRMLAMMS
HGHYAAAYDVDSIEVRMEQLFSRASSVILANISFENLDGLEEFEVLPTSTPDLSSEGPLV
LSGRYRGVFPEMLKAKGVLADLSNFSVDLKAVQSKDIPLDKVLARQQVELITAQAWLTEN
KDLEQKIAQTSIQHAVISEYTRMILMETDRGKVVTESTSKRKVSTAAKNIEEPKLEKKIL
LENLAVGFGNYSATVENIPPGASETKPETAEILAKAASNCCGKMCDICCCMCCIRTCSKM
NDQCAIVLTQFLGSLACLGCFACCELCCSVNDG

Transcript Sequence

Gene sequence data has not been registered.